CDS

Accession Number TCMCG006C119419
gbkey CDS
Protein Id XP_013643957.1
Location complement(join(42057603..42057698,42057801..42057872,42057957..42058028,42058130..42058351,42058442..42058534,42058616..42058708,42058864..42058950,42059027..42059059,42059156..42059250,42059530..42059614,42059743..42059829,42059905..42060001,42060078..42060166,42060254..42060343,42060429..42060557,42060640..42060714,42060858..42060950,42061068..42061127,42061214..42061451,42061541..42061779))
Gene LOC106348710
GeneID 106348710
Organism Brassica napus

Protein

Length 714aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013788503.2
Definition threonine--tRNA ligase, mitochondrial 1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category J
Description threonine--tRNA ligase
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R03663        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01868        [VIEW IN KEGG]
EC 6.1.1.3        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004812        [VIEW IN EMBL-EBI]
GO:0004829        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006418        [VIEW IN EMBL-EBI]
GO:0006435        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016875        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043038        [VIEW IN EMBL-EBI]
GO:0043039        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:0140101        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTCCTCCGTCTCTCGGCTCGCTCTATCCGTCGTTTCACTGCTTCTCACTCTGTCTCTCCGCCACCGTCTCGCTTAGCCTCCCTCTCCTCGTTCCGCACCGTTCCATCAATGGCAGCCAGCAATCAAAAGAACGAGGCTTATCTCTCCGCCGTCATCCCCAAGCGCATCACCCTCTTCGAGCAGATCCAAGCCGATCAGCTCGAGAAGCTCAAGTCTCTGCCACACGATCCGATCAAGATTACGTTGCCGGATGGGAGCGTGAAGGAAGGGAAGAAGTGGGAGACGACTCCGATGGACATCGCCGCTCAGATTTCGAAGGGTTTGGCTAACTCCGCGTTGATTTCGTCGGTCAACGACGAGCTCTGGGACATGAGTAGGCCGTTGGAAGGGGATTGTAAGCTTGAGCTGTTTAAGTTTGATAGTGATAAAGGAAGGGACACTCTCTGGCACTCTAGTGCTCACATTCTTGGTCAGGCTATTGAGCAGGAGTATGGGTGTAAGCTATGCATTGGACCATGTACAACGAGAGGGGAGGGTTTCTACTATGATGCGCGTTATGAAAATGACTTGGGGCTGAATGACAATCACTTCCCTAACATCGAAGCAGGTGCTGCGAAAGCTGCTAAGGAAGCGCAACCATTTGAAAGGATTGAAGTGACAAAAGATCAGGCAATGGAGATGTTTTCTGATAACAAGTTTAAGATTGAAATCATCAAGGATTTACCTGCAGACAAGACCATTACTGTCTATAGATGTGGGCCTCTTGTTGATTTGTGTCGTGGACCGCACATACCAAACACTTCTTTTGTGAAAGCTTTCAAGTGTTTGAGGGCCTCATCAGCTTACTGGAGGGGTGACAAAGAGCGTGAGAGTTTGCAGAGAGTTTATGGGATATCTTATCCAGATCAGAAACAGCTGAAGAAATATCTTCAATTCCTAGAAGAAGCTAAAAAGTATGACCACAGACTATTGGGCCAAAAGCAGGAACTTTTCTTTTGTCATCATCTCAGCCCTGGGAGTTGGTTCTTTCTTCCACTCGGCACTCGTGTATATAACAAGTTGATGGAATTCATTAAGGAGCAATACTGGAAAAGGGGTTACACTGAGGTCATAACGCCAAATATGTACAACATGAATCTGTGGGAAACTTCTGGACATGCTGCAAATTACAAGGAGAATATGTTTACTTTTGATATTGAGAAGCAGGAGTTCGGGCTCAAACCTATGAATTGCCCCGGTCACTGCTTGATGTTCCAACACAGGGTTCGCTCATACAGAGAGTTACCTATTCGACTTGCTGACTTTGGAGTGTTGCACCGCAATGAGGCAAGTGGAGCCCTTAGTGGGTTGACTCGTGTCCGGCGGTTCCAGCAGGATGATGCACACATATTCTGTACAGAGGATCAGGTTACGGAAGAAGTGAAGGCTGTGTTGGAGTTCATTGACTACGCTTACAAAATCTTTGGCTTTACCTATGAGCTAAAGCTCTCAACGAGGCCAGAAAAGTACCTTGGAGATTTGGCAACATGGGATAAAGCTGAAAATGATCTCAAAGTAGCCCTAGATGCCTTTGGAAAGACATGGCAGTTGAACGAGGGGGATGGTGCATTCTATGGCCCAAAGATAGACATCACTGTCTCTGACGCACTTAATAGGAAGTTTCAGTGTGCTACTTTACAGCTCGATTTTCAACTTCCCGATCGCTTCAAACTGGAGTACTCAGGTGACGACGAAGCGAAGAGGAATAGACCTGTGATGATACATAGAGCCGTGTTGGGATCTGTGGAACGTATGTTCGCCATATTGTTGGAGCACTACAAAGGCAAATGGCCCTTCTGGTTAAGTCCGCGACAGGCCATAGTGTGCCCTATATCGAAGAAGTCTGAGGAATATGCATTAAAGGTGAAAGAACAAATTCATGAAGCTGGCTACTATGTTGATGCTGACATAACAGACAGAAAGATCGATAAGAAGGTGCGAGAAGCTCAGCTTGCGCAGTACAACTACATACTTGTGGTCGGTGAGACTGAAGCTGCTACAGGACAGGTGAGTGTACGGATAAGAGACAGTGCAGCCCACTCGGTGAAGAGCATCGACGATTTGCTGGAAGAATTCAAGACCAAGACTGCCGAGTATCAATGA
Protein:  
MLLRLSARSIRRFTASHSVSPPPSRLASLSSFRTVPSMAASNQKNEAYLSAVIPKRITLFEQIQADQLEKLKSLPHDPIKITLPDGSVKEGKKWETTPMDIAAQISKGLANSALISSVNDELWDMSRPLEGDCKLELFKFDSDKGRDTLWHSSAHILGQAIEQEYGCKLCIGPCTTRGEGFYYDARYENDLGLNDNHFPNIEAGAAKAAKEAQPFERIEVTKDQAMEMFSDNKFKIEIIKDLPADKTITVYRCGPLVDLCRGPHIPNTSFVKAFKCLRASSAYWRGDKERESLQRVYGISYPDQKQLKKYLQFLEEAKKYDHRLLGQKQELFFCHHLSPGSWFFLPLGTRVYNKLMEFIKEQYWKRGYTEVITPNMYNMNLWETSGHAANYKENMFTFDIEKQEFGLKPMNCPGHCLMFQHRVRSYRELPIRLADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTEDQVTEEVKAVLEFIDYAYKIFGFTYELKLSTRPEKYLGDLATWDKAENDLKVALDAFGKTWQLNEGDGAFYGPKIDITVSDALNRKFQCATLQLDFQLPDRFKLEYSGDDEAKRNRPVMIHRAVLGSVERMFAILLEHYKGKWPFWLSPRQAIVCPISKKSEEYALKVKEQIHEAGYYVDADITDRKIDKKVREAQLAQYNYILVVGETEAATGQVSVRIRDSAAHSVKSIDDLLEEFKTKTAEYQ